LOC_Os05g39670

Expression Profile

RGAP LOCUS ID LOC_Os05g39670
RAP-DB ID Os05g0474400
Function prenylated rab acceptor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11

2) CELLO Prediction
localization PlasmaMembrane
score 3.955

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.38
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPRA1
Function assigned as per literature OsPRA1 may function as a Rab effector for vacuolar trafficking in the plant system.
Subcellular localization as per literature PVC
Cells used for localization experiment Arabidopsis protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID not available
Reference of localization https://www.sciencedirect.com/science/article/pii/S0168945209001939
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.077
NLS score -0.47
Protein Sequence >LOC_Os05g39670.1 protein
MASSAPTPPPLLPVTNPAAAGSSPAATAVGSDAPIATPAFRLFLSKLSDSARRSLSDRRPWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAF
ALGASLLAHPFSLLVLLGLLAAWCFLYLFRGSDQPVVLFGRTFSDRETLLGLVVASFVAFFFTSVASLIISGLLVGGAIVAVHGACRMPEDLFLDDADAA
SGNSAAQGLLSFLGAPGSRV

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
3
GO Category Biological Process
GO Term transport
4
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No