LOC_Os05g39560

Expression Profile

RGAP LOCUS ID LOC_Os05g39560
RAP-DB ID Os05g0472700
Function metal cation transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 4.079

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.82
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsZIP5
Function assigned as per literature OsZIP5 plays a role in Zn distribution within rice
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment root cells in rice
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 20419467
Reference of localization https://link.springer.com/article/10.1007%2Fs11103-010-9637-0
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.068
NLS score -0.47
Protein Sequence >LOC_Os05g39560.1 protein
MATAAMTKVFVLLFLVAACYLPAHAAAAECDCATDTAGRDKAQALRLKVIAIFCILAGSTVGAALPSLGGRFPAIQPETDVFLSVKAFAGGVILATGLVH
ILPAAFEALSSPCLVGGPWKRFPFAGMVAMVSAIGTLIVDTVATGYFHRTDAKRKAAAVADEPADDLEASDEHSHGHAHGMSVMSVAPAGEEDLVRHRVI
SQVLELGVVVHSLIIGMSLGASDFPSTVRPLVPALTFHQFFEGIGLGGCIVQAKFRVRSVVTMALFFSLTTPAGIVVGIGISSVYDANSPTALVVQGLLE
AAAAGILVYMALVDILAEDFMKTKVQRRGRLQLAMNVALLLGAGLMSMIAIWA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Biological Process
GO Term transport
5
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No