LOC_Os05g38530

Expression Profile

RGAP LOCUS ID LOC_Os05g38530
RAP-DB ID Os05g0460000
Function DnaK family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 2.782

3) NUCPRED Prediction
localization Non Nuclear
score 0.26

4) Y-Loc Prediction
localization Cytoplasm
score 82
confidence value 0.43
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsctHSP70-1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.127
NLS score 0.21
Protein Sequence >LOC_Os05g38530.1 protein
MSKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGP
GDKPMIVVQYKGEEKQFAAEEISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNV
LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYT
TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLD
VTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTT
GQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDK
MKELEGICNPIIAKMYQGPGADMAGGMDEDAPAGGSGAGPKIEEVD

GO Analysis
1
GO Category Molecular Function
GO Term nucleotide binding
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Cellular comBiological Processonent
GO Term cytosol
5
GO Category Cellular comBiological Processonent
GO Term mitochondrion
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
7
GO Category Biological Process
GO Term protein metabolic process
8
GO Category Biological Process
GO Term cellular process
9
GO Category Biological Process
GO Term response to abiotic stimulus
10
GO Category Biological Process
GO Term response to stress
11
GO Category Cellular comBiological Processonent
GO Term membrane
12
GO Category Cellular comBiological Processonent
GO Term vacuole
13
GO Category Biological Process
GO Term biological_process
14
GO Category Cellular comBiological Processonent
GO Term cell wall
15
GO Category Biological Process
GO Term response to biotic stimulus
Presence of Splice variants No