LOC_Os05g38290

Expression Profile

RGAP LOCUS ID LOC_Os05g38290
RAP-DB ID Os05g0457200
Function protein phosphatase 2C, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Chloroplast
score 2.382

3) NUCPRED Prediction
localization Non Nuclear
score 0.26

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.08
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPP2C49
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.139
NLS score 0.15
Protein Sequence >LOC_Os05g38290.2 protein
MAAEICREEAAKSMPAAAAGATAIARRRRRVEGFRFAAGSLEPPQEDADAGVARCGKRQRVAGARAGAGAATAGPCRPSAGAEFGSRWWPRYGVTSVFGR
RREMEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAYKKAVSGKEAAAAAPAWKDVMEKGFARMDDEATIWAKSRTGGEPACR
CELQTPARCDHVGSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEP
EVTVTERADDDECLILASDGLWDVVTNEMACEVVRACFRSNGPPSPPGCSRPKAVLPPPAGASGGGGGDAVVKGVDKAESDKACADAALLLAKLAIARRS
ADNVSVVVVDLRRPVP

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein modification process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants YES