LOC_Os05g36070

Expression Profile

RGAP LOCUS ID LOC_Os05g36070
RAP-DB ID Os05g0436400
Function signal peptide peptidase domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 8

2) CELLO Prediction
localization PlasmaMembrane
score 4.935

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.53
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSPP2
Function assigned as per literature Rice SPPs have an important function in differentiation and development at the shoot apex
Subcellular localization as per literature ER
Cells used for localization experiment Arabidopsis suspension-cultured cell line
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19688213
Reference of localization https://link.springer.com/article/10.1007/s00299-009-0760-9
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.087
NLS score -0.47
Protein Sequence >LOC_Os05g36070.2 protein
MKTHERAANLALAGLSLAPLVVKVNPNANVILTACLAVYVGCYRSVKPTPPAETMSKEHAMRFPLVGSAMLLSLFLLFKFLSKDLVNTVLTAYFFILGIA
ALCATLLPSIKRFLPKEWNDNAIVWRAPLFHSLSVEFTRSQVVASIPGFFFCIWYAAKKHWLANNVLGISFCIQGIEMLSLGSFKTGAILLSGLFFYDIF
WVFFTPVMVSVAKSFDAPIKLLFPTGDAARPFSMLGLGDIVIPGIFVALALRFDVSRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQAAQPALLYIVPGVI
GFVAVHCLWNGEVKPLLEYNESKAEEEEACEEDTDSKQNKKKE

GO Analysis
1
GO Category Biological Process
GO Term pollination
2
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
3
GO Category Biological Process
GO Term multicellular organismal development
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Cellular comBiological Processonent
GO Term membrane
6
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants YES