LOC_Os05g34290

Expression Profile

RGAP LOCUS ID LOC_Os05g34290
RAP-DB ID Os05g0415200
Function glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 1.801

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.09
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPCS1
Function assigned as per literature OsPCS1 has role in reducing arsenic levels in rice grains
Subcellular localization as per literature cytosol
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28621830
Reference of localization https://onlinelibrary.wiley.com/doi/full/10.1111/tpj.13612
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.098
NLS score -0.13
Protein Sequence >LOC_Os05g34290.1 protein
MASKPSSRAESNQAAAAVPSLYGRALPSPPAVEFASAEGRRLFAEALQGGTMQGFFSLVSVFQTQSEPAFCGLATLAVVLNALRIDPGRRWKGPWRWFDE
SMLDCCEHLDTVRAEGITFGKVACLAHCSGADVRTFRAAQATLADLRRHLLRCASSQDCHLVASYHRKLLGQTGTGHFSPIGGYHAGQDMALILDVARFK
YPPHWIPLPLLWEAMNTIDEATGLLRGFMLISRNTEAPLLIRAVVN

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term binding
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Molecular Function
GO Term transporter activity
6
GO Category Biological Process
GO Term response to stress
7
GO Category Biological Process
GO Term response to biotic stimulus
8
GO Category Biological Process
GO Term carbohydrate metabolic process
9
GO Category Biological Process
GO Term catabolic process
10
GO Category Biological Process
GO Term secondary metabolic process
11
GO Category Biological Process
GO Term biological_process
12
GO Category Cellular comBiological Processonent
GO Term cytosol
13
GO Category Molecular Function
GO Term hydrolase activity
14
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
15
GO Category Biological Process
GO Term biosynthetic process
16
GO Category Molecular Function
GO Term transferase activity
Presence of Splice variants No