| RGAP LOCUS ID |
LOC_Os05g33730 |
| RAP-DB ID |
Os05g0407500 |
| Function |
gibberellin receptor GID1L2, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
13 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
1.046 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.04 |
4) Y-Loc
Prediction
|
| localization |
Nuclear |
| score |
62.92 |
| confidence value |
0.41 |
| Number Of Software Predicting Nucleus |
1 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
GID1|OsGID1 |
| Function assigned as per literature |
GID1 is a soluble receptor mediating GA signalling in rice |
| Subcellular localization as per literature |
Nucleus |
| Cells used for localization experiment |
Transgenic rice |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
16193045 |
| Reference of localization |
https://www.nature.com/articles/nature04028 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.105 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os05g33730.1 protein
MAGSDEVNRNECKTVVPLHTWVLISNFKLSYNILRRADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPI
LEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSG
GNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCD
RQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYY |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
signal transduction |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
response to endogenous stimulus |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 5 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| 6 |
| GO Category |
Molecular Function |
| GO Term |
hydrolase activity |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
biosynthetic process |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
carbohydrate metabolic process |
|
| 9 |
| GO Category |
Biological Process |
| GO Term |
anatomical structure morphogenesis |
|
| 10 |
| GO Category |
Biological Process |
| GO Term |
flower development |
|
| Presence of Splice variants |
No |
