LOC_Os05g33040

Expression Profile

RGAP LOCUS ID LOC_Os05g33040
RAP-DB ID Os05g0398000
Function cyclin, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 8

2) CELLO Prediction
localization Nuclear
score 2.059

3) NUCPRED Prediction
localization Non Nuclear
score 0.22

4) Y-Loc Prediction
localization Nuclear
score 98.33
confidence value 0.93
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCYCP1;1
Function assigned as per literature OsCYCP1;1 iis a PHO80 homologous protein which negatively regulates phosphate starvation signaling in the roots of rice
Subcellular localization as per literature Predominantly localized in nucleus with slight expression in cytoplasm
Cells used for localization experiment Tobacco leaves
NUCLEAR or Not Nuclear NUCLEAR
PMID 25315105
Reference of localization https://link.springer.com/article/10.1007%2Fs11103-014-0254-1
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.106
NLS score -0.47
Protein Sequence >LOC_Os05g33040.3 protein
MGMGTFTTDESDKHEESYLSLGLTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLYAERIFKYSECSPSCFVLA
LIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMVLVIDRPIQQ
VHGVNSTKDLSRNSSIDESCKSELMRYSSQALQGCS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term kinase activity
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Biological Process
GO Term cell cycle
Presence of Splice variants YES