LOC_Os05g32850

Expression Profile

RGAP LOCUS ID LOC_Os05g32850
RAP-DB ID Os05g0395300
Function CBS domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 2.12

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.46
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) DPS1
Function assigned as per literature DPS1 plays a vital role in regulating ROS homeostasis, anther cuticle formation, and panicle development in rice.
Subcellular localization as per literature Mitochondria
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 31433495
Reference of localization https://nph.onlinelibrary.wiley.com/doi/abs/10.1111/nph.16133
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.097
NLS score -0.47
Protein Sequence >LOC_Os05g32850.1 protein
MAAAVGRARGAASLAAAVRVAAATARPASSVAAAAGLGFAGLVVQGEDTPFGSVWWWAYAGISCFLVLFAGIMSGLTLGLMSLGLVELEILQRSGTDAEK
AQAAAILPVVQKQHQLLVTLLLCNACAMEALPIFLDRIFHPVVAVILSVTFVLAFGEVIPQAICTRYGLAVGANFVWLVRILMIICYPISYPIGKLLDCA
LGHNESALFRRAQLKALVSIHSKEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVDSKLDWEAIGKILARGHSRVPVYSGNPRNIIGLLL
VKSLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKAKPKIVPLPDKTEPNREVSGAPQLTAPLLSNNEERVESLVVDIEKPQSR
QVNGNKPCSMQQNEMPYAMSRSSEDIDDGEVIGIITLEDVFEELLQEEIVDETDEYVDVHKRIRVAAAAAASSVARAPSIRRLTGQKGTGTQNRQGQPTG
ILKKPTEGDSNPSKHQVNLVEPLLENKR

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES