LOC_Os05g26890

Expression Profile

RGAP LOCUS ID LOC_Os05g26890
RAP-DB ID Os05g0333200
Function G-protein alpha subunit, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Cytoplasmic
score 3.017

3) NUCPRED Prediction
localization Non Nuclear
score 0.41

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.74
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) D1|RGA1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.152
NLS score -0.47
Protein Sequence >LOC_Os05g26890.1 protein
MGSSCSRSHSLSEAETTKNAKIKLLFQTGFDEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVISPDNQEIGEKLSDIDGRLDYPLLNKELV
LDVKRLWQDPAIQETYLRGSILQLPDCAQYFMENLDRLAEAGYVPTKEDVLYARVRTNGVVQIQFSPVGENKRGGEVYRLYDVGGQRNERRKWIHLFEGV
NAVIFCAAISEYDQMLFEDETKNRMMETKELFDWVLKQRCFEKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPIAPGKQEVEHAYEFVKKKFEELYF
QSSKPDRVDRVFKIYRTTALDQKLVKKTFKLIDESMRRSREGT

GO Analysis
1
GO Category Biological Process
GO Term response to endogenous stimulus
2
GO Category Biological Process
GO Term signal transduction
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term response to abiotic stimulus
5
GO Category Molecular Function
GO Term protein binding
6
GO Category Cellular comBiological Processonent
GO Term intracellular
7
GO Category Cellular comBiological Processonent
GO Term plasma membrane
8
GO Category Molecular Function
GO Term enzyme regulator activity
9
GO Category Biological Process
GO Term biological_process
10
GO Category Molecular Function
GO Term signal transducer activity
11
GO Category Biological Process
GO Term biosynthetic process
12
GO Category Cellular comBiological Processonent
GO Term cellular_component
13
GO Category Biological Process
GO Term catabolic process
14
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
15
GO Category Biological Process
GO Term protein modification process
16
GO Category Biological Process
GO Term metabolic process
17
GO Category Molecular Function
GO Term molecular_function
18
GO Category Molecular Function
GO Term hydrolase activity
19
GO Category Molecular Function
GO Term receptor binding
20
GO Category Molecular Function
GO Term nucleotide binding
21
GO Category Cellular comBiological Processonent
GO Term membrane
22
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
23
GO Category Biological Process
GO Term cellular component organization
24
GO Category Biological Process
GO Term post-embryonic development
25
GO Category Biological Process
GO Term cell death
Presence of Splice variants No