LOC_Os05g25770

Expression Profile

RGAP LOCUS ID LOC_Os05g25770
RAP-DB ID Os05g0322900
Function WRKY45, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 2.266

3) NUCPRED Prediction
localization Non Nuclear
score 0.41

4) Y-Loc Prediction
localization Nuclear
score 86.06
confidence value 0.44
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category WRKY

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsWRKY45|WRKY45
Function assigned as per literature WRKY45 interact with Pb1 to provide blast resistamce
Subcellular localization as per literature Nuclear
Cells used for localization experiment rice leaf epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 23696671
Reference of localization http://www.pnas.org/content/110/23/9577
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 2
Basic residues % 0.095
NLS score 0.51
Protein Sequence >LOC_Os05g25770.1 protein
MTSSMSPAPAPAYAQVMEDMEKGKELAAQLQGLLRDSPEAGRFVDQILHTFSRAMRALDKAAVSAAGGEGSEVQSEVTCGGGASAGGKRKAPAADRKANC
RRRTQQSSGNSVVVKNLDDGQAWRKYGQKEIQNSKHPKAYFRCTHKYDQLCTAQRQVQRCDDDPASYRVTYIGEHTCRDPATAPIIAAHVIHQVAAGDND
DGCGGLQAGSRLISFVAAPAAPVDAAAAPTTSTITTVTAPGPLLQPLKVEGGVGSSDQEEVLSSLTPGSSAARGGGGGGGVAGPFGPDQGDVTSSLHWSY
DAVAGMEFFKNDEVVFDLDDIMGLSF

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Cellular comBiological Processonent
GO Term nucleolus
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
5
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants No