LOC_Os05g23740

Expression Profile

RGAP LOCUS ID LOC_Os05g23740
RAP-DB ID Os05g0303000
Function DnaK family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Chloroplast
score 3.13

3) NUCPRED Prediction
localization Non Nuclear
score 0.13

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.55
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsHsp70CP1
Function assigned as per literature OsHsp70CP1 is essential for chloroplast development under high-temperature conditions
Subcellular localization as per literature Chloroplast
Cells used for localization experiment Rice and maize mesophyll protoplasts and Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23394789
Reference of localization https://www.sciencedirect.com/science/article/pii/S0176161713000345
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.123
NLS score -0.22
Protein Sequence >LOC_Os05g23740.1 protein
MATTTFPTSTPFFAHHGRRRPSPSVSVRTAAAVYGRGGGRRWRPLRVACEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGARTTPSVVAYTKSGDRLVGQ
IAKRQAVVNPENTFFSVKRFIGRKMNEVDEESKQVSYRVIRDDNGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVITVPAYFNDSQRT
ATKDAGRIAGLEVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGNFKNDEGIDLLKDKQ
ALQRLTEAAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLRTPVDNALRDAKLSFKDIDEVILVGGSTRIPAVQDLVKKMT
GKDPNVTVNPDEVVALGAAVQAGVLSGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSF
RLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPKDEVEKMVEEAEKFAKEDKEKRDAIDTKNQAESVIYQTEKQLKELGDKV
PGDVKGKVEAKLTELKDAVAGGSTQTMKDALAALNQEVMQLGQALYSQQGAPGAGPTPGADAAAGSAGPSEKPGGEEGDVIDADFTDSQ

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term nucleus
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Biological Process
GO Term response to stress
6
GO Category Biological Process
GO Term response to abiotic stimulus
7
GO Category Biological Process
GO Term transport
8
GO Category Cellular comBiological Processonent
GO Term thylakoid
9
GO Category Biological Process
GO Term biological_process
10
GO Category Molecular Function
GO Term protein binding
11
GO Category Cellular comBiological Processonent
GO Term plastid
12
GO Category Cellular comBiological Processonent
GO Term mitochondrion
Presence of Splice variants No