LOC_Os05g23350

Expression Profile

RGAP LOCUS ID LOC_Os05g23350
RAP-DB ID Os05g0298700
Function glycosyl hydrolase family 10 protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 1.131

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Cytoplasm
score 61
confidence value 0.57
Number Of Software Predicting Nucleus 0
Seed Specific Yes
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) XYH
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.126
NLS score 0.28
Protein Sequence >LOC_Os05g23350.1 protein
MALAHEVAFEVNLIEDDGGLAGWAPVGTRTALSSHAERDTAMLISGAVSAAEPNERIRRSSGRYIVASRRADEEDGLRRAVPAGALVPRVTYRVVGWVSV
QGQGDGRHHAVRVGLRVDGDGGDDERGSWLDCGAARVEVGGGWAEINGAFRLRASPRVAAVHVHGAPAGVDVKVMDLQVYATDRKARLTQLKEQTDKVRK
RDVILNLGGGATMAGASIRVAQLLENRFPFGSCINKTAIRNPKFVDFFCENFDWAVFENELKWYSTEPQRGQINYRDADELLDFCHRYGKSARGHCIFWA
VDGDVQQWVKDLGRDDLAAAVQGRLHGLLSRYAGRFRHYDVNNEMLHGRFYRDRLGDGVAPLMFREAARLDPAARLFVNDYNVLRGNDPNATPEKYVELV
DALRRGGAAVGGIGVQGHMDSPVAGQVIRAALDKLAAAGGAPIWITELDVSEPDVGLRADDLEVVLREAYAHPAVEGVVLWGFMEGQMWRRDAYLVDADG
TVNEAGQRFLQLQREWRSDARGIVDGDGRFKFRGFHGTYVAQVTTATGKMLKTFTVEKGDNSLELDLDIEI

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term carbohydrate metabolic process
Presence of Splice variants No