LOC_Os05g22970

Expression Profile

RGAP LOCUS ID LOC_Os05g22970
RAP-DB ID Os05g0295800
Function glyoxalase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Mitochondrial
score 1.708

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.47
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGLYI-8
Function assigned as per literature OsGLYI‐8, functions in the detoxification of methylglyoxal in the nucleus
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion peel epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 27797431
Reference of localization https://onlinelibrary.wiley.com/doi/abs/10.1111/tpj.13407
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.135
NLS score -0.47
Protein Sequence >LOC_Os05g22970.1 protein
MAAAAIAAASLLPSSAFALRRLSSAANVSRFAQLKRFDRARRFAPAAAMSTSSGPKEAPANNPGLQAPSEKDPATKGYFMQQTMFRVKDPKVSLDFYSRV
MGMSLLKRLDFPEMKFSLYFLGYEDVESAPTDPVKRTVWTFGQRATLELTHNWGTENDPEFKGYHNGNSDPRGFGHIGVTVHDVYKACERFERLGVEFVK
KPDDGKMKGIAFIKDPDGYWIEIFDLNRIGAVTAEAS

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Biological Process
GO Term biological_process
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Biological Process
GO Term carbohydrate metabolic process
5
GO Category Molecular Function
GO Term protein binding
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No