LOC_Os05g19970

Expression Profile

RGAP LOCUS ID LOC_Os05g19970
RAP-DB ID Os05g0279400
Function ZOS5-06 - C2H2 zinc finger protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 4.265

3) NUCPRED Prediction
localization Nuclear
score 0.83

4) Y-Loc Prediction
localization Nuclear
score 95.28
confidence value 0.73
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) EBR1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.13
NLS score -0.16
Protein Sequence >LOC_Os05g19970.1 protein
MDDSCAVCADALEWVAYGACGHREVCSTCVVRLRFVMGDKHCCICKTECSSVFVTKAMGDYTKVINDFNIFPPVATEGKVGEYWYHEDSQAFFDDAEHYK
MIRAMCRLSCSVCDKAEDQAGQAAQVRRKSKFRSIEQLKGHLFHQHRLYMCSLCLEGRKVFICEQKLYTRTQLNQHVKTGDSEVDGSEVERSGFAGHPMC
EFCRSSFYGDNELYTHMSREHYSCHICQRQHPGQYDYFRNYDDLELHFRKDHFLCEDEACLAKKFVVFQSEAELKRHNAMEHGGRMSRAQRNAALQIPTS
FIYRRNEQDERRGRGRGRNSHRDGSDRDTPSMQNGSAIIGNGFPSRVDNVTGSVSVSSSSGRGESGQSSGNGRVFEHLSFPPLQDQDIPDARMDSAPDET
SFPSLSEQQTRYAHALSQSSLAAKLGDELLFPPLPGSSSNRGSTSTQQGLQSLAKNTLASRLQQRSKGSVKVLHSARPRPSENPESVPPVSSSPQMWPTP
DQGLLHSSSSQLRIVRENGIMSSADSAWNPGGGASNRMKHSVSTPNLMSGGSSVQALSTSNGGNKKQQPPQSSQTLPAADDVRAANKTLVERMRSALGMD
EDRYSAFKEIAGEYRQGIIGTSEYLSYVEQFGLSHLVPEMARLLPDPQKQKELADAYHTNIRFRSLQENSDGLTITSKEGGRKKKGKGKSHDVTETSAAP
AKDMKDSLADSFLDTVRKLQLNKTQEGEAEVLSRDGYRSSKGKAQLITGGSSSSTPCLDGDHGAISMASCAKDDVGKGGGSSNSNINKQSKKTSKFLRAR
LGDNSLATLDLSRPTMSPERPERESQGPQVGLPMRGVWKNGGGQKLFTGNGRK

GO Analysis
1
GO Category Molecular Function
GO Term binding
Presence of Splice variants No