| RGAP LOCUS ID |
LOC_Os05g11730 |
| RAP-DB ID |
Os05g0207500 |
| Function |
CGMC_GSK.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
9 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
1.417 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.29 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
93 |
| confidence value |
0.72 |
| Number Of Software Predicting Nucleus |
1 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
GSK2|OsGSK2|OsSK22 |
| Function assigned as per literature |
GSK2 mediates brassinosteroid responses in rice |
| Subcellular localization as per literature |
Cytoplasm and nucleus |
| Cells used for localization experiment |
Rice protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
22685166 |
| Reference of localization |
http://www.plantcell.org/content/24/6/2562.long |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.109 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os05g11730.1 protein
MDQPAPAPEPMLLDAQPPAAVACDKKQQEGEAPYAEGNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY
KNRELQLMRAMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNANHRMPLIYVKLYMYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLT
HQVKLCDFGSAKTLVPGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRF
PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALDACAHPFFDELREPNARLPNGRPFPPLFNFKHELANSSQELISRLIPEHVRRQATHNFFNT
GS |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 3 |
| GO Category |
Molecular Function |
| GO Term |
kinase activity |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
response to endogenous stimulus |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
signal transduction |
|
| 9 |
| GO Category |
Biological Process |
| GO Term |
biological_process |
|
| 10 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 11 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| Presence of Splice variants |
No |
