| RGAP LOCUS ID |
LOC_Os05g11510 |
| RAP-DB ID |
Os05g0204600 |
| Function |
B-box zinc finger family protein, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
6 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
2.895 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.45 |
4) Y-Loc
Prediction
|
| localization |
Nuclear |
| score |
99.91 |
| confidence value |
0.7 |
| Number Of Software Predicting Nucleus |
2 |
| Seed Specific |
No |
| Transcription factor category |
Orphans/DBB |
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsBBX14 |
| Function assigned as per literature |
OsBBX14 regulates heading date differently under Long-day (LD) and short-day (SD) conditions |
| Subcellular localization as per literature |
Nucleus |
| Cells used for localization experiment |
Rice protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
27095397 |
| Reference of localization |
https://www.sciencedirect.com/science/article/pii/S0168945216300292?via%3Dihub |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
1 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.074 |
| NLS score |
-0.16 |
| Protein Sequence |
>LOC_Os05g11510.1 protein
MSPPPPPYYHHLLLLRSSPTTTGGGARVLAAAELARMKLLCSACEAAEASVLCCADEAALCARCDRDIHAANRLAGKHLRLPLLSPASSSSSSAAALAPP
PPSPPKCDICQESHAYFFCLEDRALLCRSCDVAVHTANAFVSAHRRFLLTGVQVGQEQDEHSPDPPEPSPPPPPPPPASKSDHPAPLYGEGGGGFSWDAA
DSPAAGGLPDWSAVVDQFGSPPPPRHTDTATVTTPPPTKRSPRAPAFGGQGGMMDWPLGEFFGGFTDFTGGFGFGFGDSGTSKADSGKLGGSTDGSPYYR
SSSEDDRNADELFGQVPEIQWSVPELPSPPTASGLHWQRHPAATHGGGGGGPDTTAFVPDICSPDSCFPATTSKRRRQ |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
biosynthetic process |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleoplasm |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
cellular component organization |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
secondary metabolic process |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 8 |
| GO Category |
Molecular Function |
| GO Term |
binding |
|
| 9 |
| GO Category |
Molecular Function |
| GO Term |
sequence-specific DNA binding transcription factor activity |
|
| 10 |
| GO Category |
Biological Process |
| GO Term |
post-embryonic development |
|
| Presence of Splice variants |
No |
