LOC_Os05g10940

Expression Profile

RGAP LOCUS ID LOC_Os05g10940
RAP-DB ID Os05g0198400
Function metal cation transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 2.566

3) NUCPRED Prediction
localization Non Nuclear
score 0.2

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.07
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsZIP7a|OsZIP7
Function assigned as per literature OsZIP7 is a Zinc (Zn) plasma membrane-localized transporter in rice
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Arabidopsis protoplasts and Nicotiana benthamiana epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 30018622
Reference of localization https://www.frontiersin.org/articles/10.3389/fpls.2018.00865/full
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.07
NLS score 0.1
Protein Sequence >LOC_Os05g10940.1 protein
MERFVQFLRRGNGLMAASLAAGSCAEEVAKAEGAGCRDDAAALRLKGVAMATILVAGVVGVGLPLAGRKRRALRTDSAAFVAAKAFAAGVILATGFVHML
HDAEHALSSPCLPAHPWRSFPFPGFVAMSAALATLVLDFLATRFYEGKHRAETERVKAAAAAALAASSASDDDITVVTVTEDDNDNKAPLLQPHSHSHSH
PHGHGHGHELAQPEGSGGEGEVPAQVRSVVVSQILEMGIVSHSVIIGLSLGVSRSPCTIRPLVAALSFHQFFEGFALGGCIAQAQFKTLSAAIMACFFAI
TTPAGIAAGAGVASFYNANSPRALVVEGILDSVSAGILIYMSLVDLIAADFLGGKMTGSTRQQVMAYIALFLGALSMSSLAIWA

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No