LOC_Os05g08810

Expression Profile

RGAP LOCUS ID LOC_Os05g08810
RAP-DB ID Os05g0180600
Function phosphatidylinositol 3-kinase, root isoform, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 5

2) CELLO Prediction
localization Nuclear
score 1.764

3) NUCPRED Prediction
localization Non Nuclear
score 0.47

4) Y-Loc Prediction
localization Cytoplasm
score 80
confidence value 0.26
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) PI3K
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.128
NLS score -0.47
Protein Sequence >LOC_Os05g08810.1 protein
MANGGEFRFFLSCDISLPLAFRVDRLLHYPTPTQPSPPQDCTTLATNKKVPELVVECKLYIDGIQFGLPVSTRLESSGPPYFWNEVMTLTAKYRDLTSLS
QLAFTVWDMSSGEDGNIVGGATIFLFNNKKQLKTGRQKLRLWPQKEADGRVPTTTPGKVPKNERGEIERLERLVNKHERGQIQHVEWLDRLFFRAMDKAK
EKCERTENLYPSLVVEFCSFEHRVVFQESGANFYAPAPVLLSNQLVTVWDPELGRTNPSEHKQLKLARSLTRGIIDKDLKPSSNERKCLQRIIKFPPTRS
LQVDEKQLVWKFRFSLMSEKKALTKFVRAVDWSDIQEAKQAVELIRKWETIDVADALELLSPDFESEEVRAYAVNILERADDEELQCYLLQLVQALRFER
SDESCLAHFLVKRAVSNIEIASFLRWYVVVELRDTAYARRYYSTYDLLENGMMKFARDDGDEDGFRLWQSLTRQTELMAQLGSIMKDVKQVRGSAQKKID
GLRQLLSGVFSELTNFDEPIRSPLAPTVLLTGVIPQESSIFKSALHPLRLAFKTANGGISKIIYKKGDDLRQDQLVIQMVSLMDRLLKLENMDLHLTPYR
VLATQPDEGMLEFIPSSSLAQILSEHRTITSYLQKFHPDEDGPFGITAQCLETFIKSCAGYSVITYIMGVGDRHLDNLLLTDDGRLFHVDFAFILGKDPK
PFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSSLILNLFNLMRRSNIPDITNEENAGLKLQEKFRLDLEDEEAIHFFQDLINESVSALFP
QMVETIHRWAQYWR

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Molecular Function
GO Term transferase activity
6
GO Category Molecular Function
GO Term binding
7
GO Category Molecular Function
GO Term kinase activity
8
GO Category Biological Process
GO Term multicellular organismal development
9
GO Category Biological Process
GO Term lipid metabolic process
10
GO Category Cellular comBiological Processonent
GO Term cytosol
11
GO Category Biological Process
GO Term response to stress
12
GO Category Biological Process
GO Term response to abiotic stimulus
13
GO Category Biological Process
GO Term transport
14
GO Category Biological Process
GO Term cellular component organization
Presence of Splice variants YES