LOC_Os05g06660

Expression Profile

RGAP LOCUS ID LOC_Os05g06660
RAP-DB ID Os05g0158500
Function OsSCP26 - Putative Serine Carboxypeptidase homologue, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization E.R.
score 5.5

2) CELLO Prediction
localization Lysosomal
score 1.648

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.06
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GS5
Function assigned as per literature GS5 controls grain size
Subcellular localization as per literature plasma membrane
Cells used for localization experiment tobacco leaf epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25711711
Reference of localization https://academic.oup.com/jxb/article/66/9/2611/678373
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.091
NLS score -0.47
Protein Sequence >LOC_Os05g06660.2 protein
MAVAAAAAARRRDVSCLLLLLCFSSSMAATGGGGGGGEQEADRVARLPGQPASPAVSQFAGYVGVDERHGRALFYWFFEAQASPAPEKKPLLLWLNGGPG
CSSIGYGAASELGPLRVARQGAALEFNQYGWNKEANLLFLESPVGVGFSYTNTSSDLSNLNDDFVAEDAYSFLVNWFKRFPQYKDNEFYISGESYAGHYV
PQLADLVYERNKDKRASTYINLKGFIVGNPLTDDYYDSKGLAEYAWSHAIVSDQVYERIKKTCNFKNSNWTDDCNAAMNIIFSQYNQIDIYNIYAPKCLL
NSTSASSPDRAFFANNQEQFRWRIKMFSGYDPCYSSYAEDYFNKHDVQEAFHANASGLLPGKWQVCSDQILNSYNFSVLSILPIYSKLIKAGLRVWLYSS
GDADGRVPVISSRYCVEALGLPIKTDWQSWYLDKQVAGRFVEYHGMTMVTVRGAGHLVPLNKPAEGLMLINAFLHGEKLPTSR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants YES