LOC_Os05g05790

Expression Profile

RGAP LOCUS ID LOC_Os05g05790
RAP-DB ID Os05g0150400
Function double-stranded RNA binding motif containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 12

2) CELLO Prediction
localization Nuclear
score 4.306

3) NUCPRED Prediction
localization Non Nuclear
score 0.67

4) Y-Loc Prediction
localization Nuclear
score 99.91
confidence value 0.97
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDRB3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.105
NLS score -0.13
Protein Sequence >LOC_Os05g05790.1 protein
MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAAAEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAG
LKLPVYTTIRSGPGHTPVFTCTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQIIVARTLASLNQTNGGKTPQQK
EKQQSSNRPSSRRPSYPKSNASFYGRLHLQKHAYPSVPPEQAMYHMWHQVQATQQKPHFPMVPTMGSTGFPPPPTVLHMYPPPRGQFTMPSSQDGLGLIP
CYPEASPVLPRYFSPYPASFVPRRPLPVNVHKIHEKRLVGADMVELPDAAVFSRYTAPDFSGTSENAVQDNKKEEYTESSPASEQESKSHTASSSATRSP
SQQLESNQDIEIMGGLRLESKKPAEQPPESSPSRVNPVLLCETGQRHHYSSVRHGDPVHRNSPQISVATSPSPIRRGDPAHINIPQISVATPPECRSPRA
QAPPRFGTRMPVNLPSSLYQQRPPWLAASVTIRTTIPVCSARPNVVNSSAGAAQPAVQILSASPRKEEPEARTNTSDTSNAATASSELNKLHI

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Biological Process
GO Term biological_process
3
GO Category Molecular Function
GO Term RNA binding
4
GO Category Cellular comBiological Processonent
GO Term cytoplasm
Presence of Splice variants No