LOC_Os05g04700

Expression Profile

RGAP LOCUS ID LOC_Os05g04700
RAP-DB ID Os05g0138300
Function OsRCI2-6 - Hydrophobic protein LTI6B, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 4

2) CELLO Prediction
localization PlasmaMembrane
score 4.324

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 1
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsLti6b|ddOs32
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.022
NLS score -0.47
Protein Sequence >LOC_Os05g04700.1 protein
MAGTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITKDGLQTASSIFSIAVCLLEFGNDICIQNSVLSAPILVI

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term response to abiotic stimulus
4
GO Category Cellular comBiological Processonent
GO Term membrane
Presence of Splice variants No