LOC_Os05g04520

Expression Profile

RGAP LOCUS ID LOC_Os05g04520
RAP-DB ID Os05g0135800
Function protein kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Cytoplasmic
score 2.482

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Cytoplasm
score 96
confidence value 0.6
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPti1a
Function assigned as per literature OsPti1a is rice immune regulator
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment  transgenic rice cultured cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25738428
Reference of localization https://www.tandfonline.com/doi/full/10.4161/15592324.2014.991569
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.114
NLS score -0.47
Protein Sequence >LOC_Os05g04520.1 protein
MSCFACCGDEDTQGVPDNRNPYPGNHPARSDAYRTADPTPRGPQPVKVQPIAVPIIPVDEIREVTKNFGDEALIGEGSFGRVYFGVLRNGRSAAVKKLDS
SKQPDQEFLAQVSMVSRLKHEHVVELLGYCVDGNLRVLAYEFATMGSLHDMLHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIK
SSNVLLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVR
QCVDSRLGGDYPPKAVAKFAAVAALCVQYEADFRPNMSIVVKALQPLLNARATNPGENAGS

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Molecular Function
GO Term nucleotide binding
6
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants No