LOC_Os05g03780

Expression Profile

RGAP LOCUS ID LOC_Os05g03780
RAP-DB ID Os05g0128400
Function cation efflux family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 8

2) CELLO Prediction
localization PlasmaMembrane
score 2.764

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Nuclear
score 57.72
confidence value 0.08
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OZT1|OsMTP1
Function assigned as per literature OsMTP1 is a Zn transporter that can also transport cobalt (Co), Fe, and Cd
Subcellular localization as per literature Vacuole
Cells used for localization experiment root cells of Arabidopsisand yeast cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23761487
Reference of localization https://academic.oup.com/jxb/article/64/10/2871/542371
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.065
NLS score -0.47
Protein Sequence >LOC_Os05g03780.1 protein
MDSHNSAPPQIAEVRMDISSSTSVAAGNKVCRGAACDFSDSSNSSKDARERMASMRKLIIAVILCIIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAI
SLFSLWAAGWEATPQQSYGFFRIEILGALVSIQLIWLLAGILVYEAIVRLINESGEVQGSLMFAVSAFGLFVNIIMAVLLGHDHGHGHGHGHGHGHSHDH
DHGGSDHDHHHHEDQEHGHVHHHEDGHGNSITVNLHHHPGTGHHHHDAEEPLLKSDAGCDSTQSGAKDAKKARRNINVHSAYLHVLGDSIQSIGVMIGGA
IIWYKPEWKIIDLICTLIFSVIVLFTTIKMLRNILEVLMESTPREIDATSLENGLRDMDGVVAVHELHIWAITVGKVLLACHVTITQDADADQMLDKVIG
YIKSEYNISHVTIQIERE

GO Analysis
1
GO Category Molecular Function
GO Term transporter activity
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term cellular homeostasis
5
GO Category Cellular comBiological Processonent
GO Term vacuole
6
GO Category Cellular comBiological Processonent
GO Term membrane
7
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No