LOC_Os05g03610

Expression Profile

RGAP LOCUS ID LOC_Os05g03610
RAP-DB ID Os05g0127200
Function phospholipase C, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 7

2) CELLO Prediction
localization Cytoplasmic
score 2.415

3) NUCPRED Prediction
localization Non Nuclear
score 0.21

4) Y-Loc Prediction
localization Cytoplasm
score 95
confidence value 0.5
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPLC4
Function assigned as per literature OsPLC4 modulates the activity of two signalling pathways, PA and Ca2+ , to affect rice seedling response to osmotic stress.
Subcellular localization as per literature ER
Cells used for localization experiment Nicotiana benthamiana epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 30175516
Reference of localization https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.13437
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.127
NLS score 0.06
Protein Sequence >LOC_Os05g03610.1 protein
MTTYRVCCFLRRFRAASNEPSEELGDVFQAYADGGGGVMGEEALRRFLREVQGEAAGGGDDELEATAREVMAFAAEQRLLRKGGAAAAGGGLTVEGFHRW
LCSDANAALDPQKRVYQDMGLPLSHYFIYTGHNSYLTGNQLSSGCSEVPIVKALHDGVRVIELDLWPNAAKDAVEVLHGRTLTSPVGLMKCLEAIREYAF
VASPYPVILTLEDHLTPDLQSKVAKMIKETFGDMLYVSETENMAEFPSPDELKGKIIVSTKPPKEYLQTKNDADADEAGVWGEEITDDKVAATAMTTEEK
CAAAEEAVAAAAVDEEMQEAETDKKTQHGVDNEYRRLIAIPLTRRKHDMDQDLKVDPDMVTRLSLGEKAYEKAIVTHGAHIIRFTQRKLLRIFPRSTRIT
SSNYNPLMGWRYGVQMVAANMQGHGRKLWLTQGMFRANGGCGYVKKPDILMNNDPDKLFDPTSKLPVKTRLKVTVYMGDGWRFDFRKTHFDKCSPPDFYA
RVGIAGVEADTRMEQTKVKMDTWIPAWDHEFEFPLSVPELALLRVEVHESDNHQKDDFGGQTCLPVWELRRGIRSVRLCDHRGEPLRSVKLLMRFDFT

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Cellular comBiological Processonent
GO Term plasma membrane
5
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants No