LOC_Os05g02070
| RGAP LOCUS ID | LOC_Os05g02070 |
| RAP-DB ID | Os05g0111300 |
| Function | expressed protein |
Sub-cellular Localization Predictions |
|
1) WoLF-PSORT Prediction |
|
| localization | mito |
| score | 11 |
2) CELLO Prediction |
|
| localization | Nuclear |
| score | 1.782 |
3) NUCPRED Prediction |
|
| localization | Non Nuclear |
| score | 0.3 |
4) Y-Loc Prediction |
|
| localization | Chloroplast |
| score | 5 |
| confidence value | 0.22 |
| Number Of Software Predicting Nucleus | 1 |
| Seed Specific | No |
| Transcription factor category | |
Experimental evidence for subcellular localization |
|
| Published gene name (updated 1 January 2020) | OsMT2b |
| Function assigned as per literature | OsMT2b is an ROS scavenger |
| Subcellular localization as per literature | Cytosol |
| Cells used for localization experiment | Rice protoplasts |
| NUCLEAR or Not Nuclear | NOT NUCLEAR |
| PMID | 15220467 |
| Reference of localization | http://www.plantphysiol.org/content/135/3/1447.long |
| Is Subcellular localization evidence by author available ? | No |
Sequence Analysis |
|
| Number of PAT4 | 0 |
| Number of PAT7 | 0 |
| Number of Bipartite | 0 |
| Basic residues % | 0.122 |
| NLS score | -0.47 |
| Protein Sequence | >LOC_Os05g02070.2 protein MDADARCSLMWRPQPPPRPSSSLLHPTRRALEEWRWRWRAARTAAAAATPASVAPAAAAAPAAPATESIVVVARLHEDLSYGCCYCRSEL |
GO Analysis |
|
| Presence of Splice variants | YES |