LOC_Os05g01444

Expression Profile

RGAP LOCUS ID LOC_Os05g01444
RAP-DB ID Os05g0104700
Function polygalacturonase inhibitor precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Extracellular
score 1.42

3) NUCPRED Prediction
localization Non Nuclear
score 0.19

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.21
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPGIP4
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.092
NLS score 0.12
Protein Sequence >LOC_Os05g01444.1 protein
MRRLIVLFKAVGAKLLPSEQLANLITPSPSTYIYPHTHIVQDKLRQNRSEVEMVRAIGPLLLLAHVLVFVVSIAAAAAPVRRPRCDAGDRAALLAVKAAF
NNASYFQSWTPDIACCHWYGVDCGGDDYDYDPTDGDRVLSLAIIRDDNVTGGIPGDAIARLTRLQELMFFKVPGVTGPIPAALATLTALRELTISRTALS
GSIPSFIGDKFTALQSLDLSFNSLTGAIPASLAKPPKLISIDLSRNQLTGSIPRLLLSKAGQQAFLTLSHNNLSGRIPAAFGAVNFVQIDLSRNQLTGDA
SMLFGSGKKELGSVYLSRNALSFDMSELRLPERLSFLDVSHNAIRGGIPAQVANLSNLQLLNVSYNRMCGEVPTGGNMARFDAYCFQHNKCLCGAPLAAC
H

GO Analysis
1
GO Category Molecular Function
GO Term enzyme regulator activity
2
GO Category Cellular comBiological Processonent
GO Term cell wall
3
GO Category Biological Process
GO Term signal transduction
4
GO Category Cellular comBiological Processonent
GO Term cellular_component
5
GO Category Biological Process
GO Term response to stress
6
GO Category Biological Process
GO Term metabolic process
Presence of Splice variants No