LOC_Os04g59610

Expression Profile

RGAP LOCUS ID LOC_Os04g59610
RAP-DB ID Os04g0692600
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Extracellular
score 2.03

3) NUCPRED Prediction
localization Non Nuclear
score 0.66

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.29
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSGRL
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.078
NLS score 0.21
Protein Sequence >LOC_Os04g59610.1 protein
MPIEAVAVASLPMASRSAALCFSSAAAARSRSRSRHGRMAVSCDAGASDLLYSSLAAKLLGPPTSFDAGKLTVEFAHSHGNSSSGFPRAYTLTHCDFTAN
LTLAVSDTIAADRRLRADDVFAEWKQQQQQEGMALHVHCFVSGANLLHGLAAGFRCGCTSTPAPTLSTTGSSAGVLSGRLQTPRRRTRGMRWSNCTTQSP
KAQEGVGGSGLARTPSSAPCSPFSFDAYREPHTLSFFCSALCASIPILSSTGHLTCMYSMYPLHDQQNEKRLPFQAFLLKLTLLLLAHSNHVWITYATSC
INSSSTFFIQNWGQHIAPSAMCSTYYILLPPLIE

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES