LOC_Os04g59550

Expression Profile

RGAP LOCUS ID LOC_Os04g59550
RAP-DB ID Os04g0692000
Function phosphate/phosphate translocator, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 4.982

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Nuclear
score 40.89
confidence value 0.26
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsUGT1
Function assigned as per literature
Subcellular localization as per literature Golgi body
Cells used for localization experiment Lec8 cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 20305274
Reference of localization https://academic.oup.com/jb/article-abstract/148/1/35/885690?redirectedFrom=fulltext
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.061
NLS score -0.22
Protein Sequence >LOC_Os04g59550.1 protein
MPMGTRLCEINQQAWGGEEEEEEEMEQGGEAGTGGGLGNLRALLAILQWWGFNVTVIIINKWIFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKPLI
QVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWSKHFEWRIWASLVPIVGGILLTSITELSFNMFGFCAAMVGCLAT
STKTILAESLLHGYKFDSINTVYYMAPFATMILALPAVLLEGGGVVTWFYTHDSIASALVIIIGSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAV
LVSWLIFRNPISPMNAIGCAITLVGCTFYGYVRHLIPQQQAVAPGTGSPTTSQTNSPRSRMEMLPLVGDKQEKV

GO Analysis
1
GO Category Molecular Function
GO Term transporter activity
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term transport
4
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES