RGAP LOCUS ID |
LOC_Os04g59450 |
RAP-DB ID |
Os04g0691100 |
Function |
CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
localization |
cysk |
score |
9 |
2) CELLO
Prediction
|
localization |
Nuclear |
score |
2.541 |
3) NUCPRED
Prediction
|
localization |
Non Nuclear |
score |
0.21 |
4) Y-Loc
Prediction
|
localization |
Cytoplasm |
score |
96 |
confidence value |
0.71 |
Number Of Software Predicting Nucleus |
1 |
Seed Specific |
No |
Transcription factor category |
|
Experimental evidence for
subcellular localization |
Published gene name (updated 1 January 2020) |
SAPK5 |
Function assigned as per literature |
SAPK5 may be involved in rice biotic defense response |
Subcellular localization as per literature |
Cytoplasm and nucleus |
Cells used for localization experiment |
Onion epidermal cells |
NUCLEAR or Not Nuclear |
NUCLEAR |
PMID |
not available |
Reference of localization |
https://link.springer.com/article/10.1007/s11105-013-0559-2 |
Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
Number of PAT4 |
0 |
Number of PAT7 |
0 |
Number of Bipartite |
0 |
Basic residues % |
0.132 |
NLS score |
-0.47 |
Protein Sequence |
>LOC_Os04g59450.1 protein
MEKYEPVREIGAGNFGVAKLMRNKETRELVAMKFIERGNRIDENVFREIVNHRSLRHPNIIRFKEVVVTGRHLAIVMEYAAGGELFERICEAGRFHEDEA
RYFFQQLVCGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF
EDPKDPKNFRKTISRIMSVQYKIPEYVHVSQPCRHLLSRIFVANPYKRISMGEIKSHPWFLKNLPRELKEEAQAVYYNRRGADHAASSASSAAAAAAFSP
QSVEDIMRIVQEAQTVPKPDKPVSGYGWGTDDDDDDQQPAEEEDEEDDYDRTVREVHASVDLDMSNLQIS |
GO Analysis |
1 |
GO Category |
Biological Process |
GO Term |
metabolic process |
|
2 |
GO Category |
Biological Process |
GO Term |
cellular process |
|
3 |
GO Category |
Cellular comBiological Processonent |
GO Term |
nucleus |
|
4 |
GO Category |
Biological Process |
GO Term |
response to stress |
|
5 |
GO Category |
Biological Process |
GO Term |
response to abiotic stimulus |
|
6 |
GO Category |
Molecular Function |
GO Term |
kinase activity |
|
7 |
GO Category |
Biological Process |
GO Term |
protein modification process |
|
8 |
GO Category |
Biological Process |
GO Term |
response to endogenous stimulus |
|
9 |
GO Category |
Molecular Function |
GO Term |
protein binding |
|
10 |
GO Category |
Cellular comBiological Processonent |
GO Term |
cytosol |
|
Presence of Splice variants |
YES |