LOC_Os04g59450

Expression Profile

RGAP LOCUS ID LOC_Os04g59450
RAP-DB ID Os04g0691100
Function CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization cysk
score 9

2) CELLO Prediction

localization Nuclear
score 2.541

3) NUCPRED Prediction

localization Non Nuclear
score 0.21

4) Y-Loc Prediction

localization Cytoplasm
score 96
confidence value 0.71
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020) SAPK5
Function assigned as per literature SAPK5 may be involved in rice biotic defense response
Subcellular localization as per literature Cytoplasm and nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID not available
Reference of localization https://link.springer.com/article/10.1007/s11105-013-0559-2
Is Subcellular localization evidence by author available ? No

Sequence Analysis

Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.132
NLS score -0.47
Protein Sequence >LOC_Os04g59450.1 protein
MEKYEPVREIGAGNFGVAKLMRNKETRELVAMKFIERGNRIDENVFREIVNHRSLRHPNIIRFKEVVVTGRHLAIVMEYAAGGELFERICEAGRFHEDEA
RYFFQQLVCGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF
EDPKDPKNFRKTISRIMSVQYKIPEYVHVSQPCRHLLSRIFVANPYKRISMGEIKSHPWFLKNLPRELKEEAQAVYYNRRGADHAASSASSAAAAAAFSP
QSVEDIMRIVQEAQTVPKPDKPVSGYGWGTDDDDDDQQPAEEEDEEDDYDRTVREVHASVDLDMSNLQIS

GO Analysis

1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term nucleus
4
GO Category Biological Process
GO Term response to stress
5
GO Category Biological Process
GO Term response to abiotic stimulus
6
GO Category Molecular Function
GO Term kinase activity
7
GO Category Biological Process
GO Term protein modification process
8
GO Category Biological Process
GO Term response to endogenous stimulus
9
GO Category Molecular Function
GO Term protein binding
10
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants YES