LOC_Os04g59440

Expression Profile

RGAP LOCUS ID LOC_Os04g59440
RAP-DB ID Os04g0690800
Function chlorophyll A-B binding protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 2.255

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.84
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) psbS2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.091
NLS score -0.47
Protein Sequence >LOC_Os04g59440.1 protein
MALQQSMAMPMMVVSDLGTAPRSSPMVQLQRMKKHLVVVAAFKSRTKASPKVDKSNKNKSIVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAV
TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDATGLERAVIPPGKGFRAALGLSEGGPLFGFTKANELFVGRLAQLGIAFSLIG
EIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTDDNDDQ

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Cellular comBiological Processonent
GO Term plastid
4
GO Category Cellular comBiological Processonent
GO Term thylakoid
5
GO Category Molecular Function
GO Term lipid binding
6
GO Category Molecular Function
GO Term binding
Presence of Splice variants No