| RGAP LOCUS ID |
LOC_Os04g58880 |
| RAP-DB ID |
Os04g0685600 |
| Function |
exo70 exocyst complex subunit, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
Nuclear |
| score |
6 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
2.041 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.57 |
4) Y-Loc
Prediction
|
| localization |
Nuclear |
| score |
99.15 |
| confidence value |
0.82 |
| Number Of Software Predicting Nucleus |
3 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
RLS2|OsEXO70A1 |
| Function assigned as per literature |
RLS2 is required for normal vascular bundle differentiation and primary nutrient assimilation. |
| Subcellular localization as per literature |
Nucleus and plasma membrane |
| Cells used for localization experiment |
Rice protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
26691393 |
| Reference of localization |
https://www.nature.com/articles/srep18609 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
1 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.126 |
| NLS score |
-0.29 |
| Protein Sequence |
>LOC_Os04g58880.1 protein
METLAQRAALLRESLQKSQSVTDAVVSILGSFDSRLSALDAAMRPIQVRTHAVRTAHENIDRTLRSADVILTQFDRTREAEREIQKGPHENLQGFLDAVD
RLRSIERFFSSNRSYRSSDGVLNHVNALLSKALVKMEDEFQKQLTQRSKPIEPDRLFDCLPSTLRPSSESHPEGGKNQSHSENQQNSEAAVYSPPALIEP
RFIPFLAKLAQQLVQAGCQQQCSEIYSEARASALESSLKSLGVEKLSKDEVQKMPWEILESKIGNWIHFMRIAVKLLFAAERQLCDQVFECSQSLRDKCF
AQITRNSLATLLSFGEAIAMSKRSPEKLFVLLDMYEIMCELQADIDTIFVGESCSQMRESALSLTKCLAQTAQKTFSDFEEAVEKDATKNIHIDGTVHPL
TSYVINYVKFLFDYQSTLKQLFQEFKREDGTGSELATVTMSIMQALQNNLDAKAKQYKDPALMHIFLMNNIHYIVKSVRRSEAKDLLGDDWIQRHRRIVQ
QNANHYRRIAWSKVLQCLSGQGLTSSGGSGQVGSEGGNSSGASRAAVKERFRSFNVLFEEIYQKQCGWSVPDTELRESLRLAVAEILLPAYRSFLKRFGP
LIENSKAPGKYVKHTPEQVELLLANLFEGKQERT |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
extracellular region |
|
| 2 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
membrane |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
transport |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
reproduction |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
post-embryonic development |
|
| 9 |
| GO Category |
Biological Process |
| GO Term |
biosynthetic process |
|
| 10 |
| GO Category |
Biological Process |
| GO Term |
multicellular organismal development |
|
| 11 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytoplasm |
|
| 12 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 13 |
| GO Category |
Biological Process |
| GO Term |
anatomical structure morphogenesis |
|
| 14 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| Presence of Splice variants |
No |
