LOC_Os04g58710

Expression Profile

RGAP LOCUS ID LOC_Os04g58710
RAP-DB ID Os04g0683700
Function AMP-binding domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Mitochondrial
score 1.269

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.25
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAAE3
Function assigned as per literature OsAAE3 functions as a negative regulator in rice blast resistance, floret development, and lignin biosynthesis
Subcellular localization as per literature cytosol
Cells used for localization experiment Rice protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28119718
Reference of localization https://www.frontiersin.org/articles/10.3389/fpls.2016.02041/full
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.095
NLS score -0.47
Protein Sequence >LOC_Os04g58710.1 protein
METPTLTTLLKAAVATFPSRRALAVPGKVDLSHAALDALVDAAAARLAADAGVLPGHVVALAFPNTVELVIMFLAVIRARAVAAPLNPAYTQEEFEFYLS
DSGARLLITNPEGNVAAQAAASKLGLAHTTASLKDAAGQVHLAGFPASAAAAAKDFANDPSDVALFLHTSGTTSRPKGVPLTQRNLAASVQNIRAVYRLT
EADATVIVLPLFHVHGLLCGLLASLASGASVTLPAAGRFSASTFWADMRGAGATWYTAVPTIHQIIIDRHTSKPEAEYPALRFIRSCSASLAPAIMEKLE
AAFGAPVVEAYAMTEASHLMTSNPLPEDGARKAGSVGRAVGQEMAILDEEGRRVEAGKSGEVCVRGANVTSGYKGNPEANEAAFRFGWFHTGDIGVVDEE
GYLRLVGRIKELINRGGEKISPIEVDSVLLGHPAIAQAVAFGVPDAKYGEEINCAVIPREGVSLGEEEVLAYCRRNLAAFKVPKKVYIADELPKTATGKI
QRRIVAQHFVVPVLPTKA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term extracellular region
2
GO Category Biological Process
GO Term biological_process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Cellular comBiological Processonent
GO Term cellular_component
5
GO Category Molecular Function
GO Term nucleotide binding
6
GO Category Molecular Function
GO Term catalytic activity
7
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No