LOC_Os04g58580

Expression Profile

RGAP LOCUS ID LOC_Os04g58580
RAP-DB ID Os04g0682300
Function phosphomannomutase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 5

2) CELLO Prediction
localization Cytoplasmic
score 3.579

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Cytoplasm
score 94
confidence value 0.48
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPMM
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.117
NLS score -0.47
Protein Sequence >LOC_Os04g58580.1 protein
MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGKSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKE
FINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEE
FQEIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQCRSLFMSK

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term catalytic activity
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term carbohydrate metabolic process
5
GO Category Biological Process
GO Term cellular process
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
7
GO Category Molecular Function
GO Term protein binding
8
GO Category Cellular comBiological Processonent
GO Term cytosol
9
GO Category Biological Process
GO Term response to stress
10
GO Category Biological Process
GO Term response to abiotic stimulus
Presence of Splice variants YES