LOC_Os04g56430

Expression Profile

RGAP LOCUS ID LOC_Os04g56430
RAP-DB ID Os04g0659300
Function cysteine-rich receptor-like protein kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Extracellular
score 3.824

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.94
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRMC|OsRLK
Function assigned as per literature OsRMC of the DUF26 subfamily involved in JA signal transduction mediates root development and negatively regulates root curling in rice.
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment epidermal cells of hypocotyls of transgenic A. thaliana
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 17470145
Reference of localization https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-3040.2007.01663.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.085
NLS score -0.47
Protein Sequence >LOC_Os04g56430.1 protein
MARCTLLVLLVAAAVAVVPLAAGQPWATCGDGTYEQGSAYENNLLNLALTLRDGASSQEILFSTGSNGAAPNTVYGLLLCRGDISRAACYDCGTSVWRDA
GSACRRAKDVALVYNECYARLSDKDDFLADKVGPGQLTTLMSSTNISSGADVAAYDRAVTRLLAATAEYAAGDIARKLFATGQRVGADPGFPNLYATAQC
AFDITLEACRGCLEGLVARWWDTFPANVDGARIAGPRCLLRSEVYPFYTGAPMVVLRE

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No