LOC_Os04g56210

Expression Profile

RGAP LOCUS ID LOC_Os04g56210
RAP-DB ID Os04g0657100
Function polyprenyl synthetase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9

2) CELLO Prediction
localization Cytoplasmic
score 2.619

3) NUCPRED Prediction
localization Non Nuclear
score 0.36

4) Y-Loc Prediction
localization Cytoplasm
score 83
confidence value 0.44
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsFPPS3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.138
NLS score -0.47
Protein Sequence >LOC_Os04g56210.1 protein
MSMQEMLRIGDDDGRSDALERELKEKLRLRGDASPAKCTRQEQRWRSDHGIVDARERFVQAYGRLRDDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNR
GLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLDDIMDDSHTRRDQICWYRRPEVGLRGINDGIILKCHILIMIKKYFREKPYFLDILEIW
SEIALQTSLGQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLEDFSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKIGTD
IEDHKCSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEVKRTYAALDLKDIFSEFERRCYNHLVTSIEAQKDHAAREILISFLKKIHQRKK

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Molecular Function
GO Term transferase activity
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants No