LOC_Os04g52830

Expression Profile

RGAP LOCUS ID LOC_Os04g52830
RAP-DB ID Os04g0619300
Function OsFBK15 - F-box domain and kelch repeat containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 7

2) CELLO Prediction
localization Extracellular
score 1.852

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Nuclear
score 88.87
confidence value 0.72
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Ctb1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.11
NLS score 0.45
Protein Sequence >LOC_Os04g52830.1 protein
MEDLQDCDCKSLVAVPGSVVLHLFRLFNQQDNSWQKYTLAYFLLVRNEYFSRDSRKHSDGKNQLLDCCDDSELDLDVLYADLDSKELELKLQKPVVKTQS
KGDSSASGSNDCFFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLACSLMPWEAFDPSRKRWMRLPRMPCDECFSC
ADKESLAVGTQLLVFGREYTGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFM
DGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAADQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKAC
GDRLLVIGGHRVPRGEVILLHSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES