LOC_Os04g52450

Expression Profile

RGAP LOCUS ID LOC_Os04g52450
RAP-DB ID Os04g0614600
Function aminotransferase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Chloroplast
score 3.017

3) NUCPRED Prediction
localization Non Nuclear
score 0.06

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.12
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Osl2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.097
NLS score -0.04
Protein Sequence >LOC_Os04g52450.1 protein
MVIARGLLRSNASSSSSQAINLLKYVTSTGSLQGHTQNLCDASTRHFSSVPSPQYNSTEENGFKGHGMLAPFTAGWQSTDVHPLVIERSEGSYVYDIDGK
KYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRTTKPSLDLAKELLSMFTAREMGKVFFTNSGSEANDSQVKLVWYYNNALGRPDKKKFIAR
SKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFATRLANNLEELILKEGPETIAAFIAEPVMGAGGVIPPPKTYFEKVQAI
VKKYDILFIADEVITAFGRLGTMFGSDMYNIKPDLVSMAKALSSAYVPIGAIMVSPEISDVIHSQSNKLGSFAHGFTYSGHPVACAVAIEALKIYQERNI
PDHVKQISPRFQEGVKAFAGSPIVGEIRGVGLILGTEFADNKSPNDPFPAEWGVGAIFGAECQKRGMLVRVAGDNIMMSPPLIMTPDEVEELVSIYGDAL
KATEERVAELKSKKNN

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Biological Process
GO Term reproduction
3
GO Category Biological Process
GO Term pollen-pistil interaction
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Biological Process
GO Term pollination
6
GO Category Biological Process
GO Term cellular component organization
7
GO Category Biological Process
GO Term anatomical structure morphogenesis
8
GO Category Biological Process
GO Term cell differentiation
9
GO Category Biological Process
GO Term cell growth
10
GO Category Molecular Function
GO Term binding
11
GO Category Cellular comBiological Processonent
GO Term mitochondrion
12
GO Category Biological Process
GO Term response to external stimulus
13
GO Category Biological Process
GO Term metabolic process
14
GO Category Biological Process
GO Term cellular process
15
GO Category Biological Process
GO Term catabolic process
16
GO Category Biological Process
GO Term response to stress
17
GO Category Cellular comBiological Processonent
GO Term membrane
18
GO Category Cellular comBiological Processonent
GO Term vacuole
19
GO Category Molecular Function
GO Term transferase activity
Presence of Splice variants YES