LOC_Os04g52230

Expression Profile

RGAP LOCUS ID LOC_Os04g52230
RAP-DB ID Os04g0611800
Function ent-kaurene synthase, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 1.158

3) NUCPRED Prediction
localization Non Nuclear
score 0.4

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.72
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsKS1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.113
NLS score -0.04
Protein Sequence >LOC_Os04g52230.1 protein
MMMLLMPRSILITAADAAPRGKKQGAQPRVMAPRRGVTRVYIEKRLGVGGGNASSLQDMHRKELQARTRDQLQTLELSTSLYDTAWVAMVPLRGSRQHPC
FPQCVEWILQNQQDDGSWGTRGFGVAVTRDVLSSTLACVLALKRWNVGQEHIRRGLDFIGRNFSIAMDEQIAAPVGFNITFPGMLSLAMGMDLEFPVRQT
DVDRLLHLREIELEREAGDHSYGRKAYMAYVTEGLGNLLEWDEIMMFQRKNGSFFNCPSTTAATLVNHYNDKALQYLNCLVSKFGSAVPTVYPLNIYCQL
SWVDALEKMGISQYFVSEIKSILDTTYVSWLERDEEIMLDITTCAMAFRLLRMNGYHVSSVELSPVAEASSFRESLQGYLNDKKSLIELYKASKVSKSEN
ESILDSIGSWSGSLLKESVCSNGVKKAPIFEEMKYALKFPFYTTLDRLDHKRNIERFDAKDSQMLKTEYLLPHANQDILALAVEDFSSSQSIYQDELNYL
ECWVKDEKLDQLPFARQKLTYCYLSAAATIFPRELSEARIAWAKNGVLTTVVDDFFDLGGSKEELENLIALVEKWDGHQEEFYSEQVRIVFSAIYTTVNQ
LGAKASALQGRDVTKHLTEIWLCLMRSMMTEAEWQRTKYVPTMEEYMANAVVSFALGPIVLPTLYFVGPKLQEDVVRDHEYNELFRLMSTCGRLLNDSQG
FERESLEGKLNSVSLLVHHSGGSISIDEAKMKAQKSIDTSRRNLLRLVLGEQGAVPRPCKQLFWKMCKIVHMFYSRTDGFSSPKEMVSAVNAVVKEPLKL
KVSDPYGSILSGN

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Cellular comBiological Processonent
GO Term plastid
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Biological Process
GO Term signal transduction
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants No