LOC_Os04g50950

Expression Profile

RGAP LOCUS ID LOC_Os04g50950
RAP-DB ID Os04g0597800
Function peptide transporter PTR2, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 11

2) CELLO Prediction
localization PlasmaMembrane
score 4.957

3) NUCPRED Prediction
localization Non Nuclear
score 0.06

4) Y-Loc Prediction
localization Cytoplasm
score 67
confidence value 0.22
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPTR6|PTR6|OsNPF7.3
Function assigned as per literature OsNPF7.3 could enhance nitrogen utilization efficiency in rice paddy
Subcellular localization as per literature vacuolar membrane
Cells used for localization experiment tobacco leaf
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28824674
Reference of localization https://www.frontiersin.org/articles/10.3389/fpls.2017.01338/full
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.069
NLS score -0.13
Protein Sequence >LOC_Os04g50950.1 protein
MDAGEIIVAQPSPRLYKSLTFRRIATKERTIPQDEEMKIRSPRFQDESLTAPFILDKKARSKAPTVVLGFECLESTAFNGIATNLVVYLETLLHGSNLAS
ASNVTTWFGTSYLTPVFGAIIADTFWGNYNTILVSLVFYLLGMMLVTFSAFLPTTALCTVVGSSCQQPLLGAQTIAFLGLYLVAFGSGGVRAALLPFGAD
QFDDDNTADRERKMSFFSWFYICVDFGMIVSGLFIVWIQQNVSWGLGFGIATACIALAFGGFVLATPMYKRRMPTGTPIKSLAQVVVAACRKARLRVPAD
TTLLYEVHDKINQSKIAHTDQFGFLDKAAVVMESDLEEESNDVAADASWRICTVTQVEELKILLRLLPIWATSIVLSAAYAQLNTTFVQQGAAMNMRIMS
FTIPPASMVSFEVLCVLAWVLMYSSVIVPMLNSLSLANGEPSQLQRMGAGRLLMAFAMAVAALVEMMRLDAAGRGESLSIAWQMPQYFALAGAEVFCYIA
QLEFFYSEAPESMKSMCTSLALLTVALGSYMSSFIYAVVNAFTAVDGRPGWISDNLNEGHMDYFFWVMAALCTLNFVVYSAFARTYRVKLVVS

GO Analysis
1
GO Category Molecular Function
GO Term transporter activity
2
GO Category Biological Process
GO Term transport
3
GO Category Cellular comBiological Processonent
GO Term vacuole
4
GO Category Cellular comBiological Processonent
GO Term membrane
Presence of Splice variants No