LOC_Os04g46460

Expression Profile

RGAP LOCUS ID LOC_Os04g46460
RAP-DB ID Os04g0550500
Function amino acid kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Chloroplast
score 2.884

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.77
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNAGK1|NAGK1
Function assigned as per literature OsNAGK1 interacts with PII-like protein in rice plants
Subcellular localization as per literature Chloroplasts
Cells used for localization experiment rice leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 15653795
Reference of localization https://academic.oup.com/pcp/article/45/12/1768/1827060
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.085
NLS score -0.47
Protein Sequence >LOC_Os04g46460.2 protein
MLLAKPHLSSSSFLPSTRVSSPAPGPNHAKPIAASPAPRRCLRLAVTSAAAPAASSAEAAAALSRVDVLSEALPFIQRFKGKTVVVKYGGAAMKSPELQA
SVIRDLVLLSCVGLHPVLVHGGGPEINSWLLRVGVEPQFRNGLRVTDALTMEVVEMVLVGKVNKHLVSLINLAGGTAVGLCGKDARLLTARPSPNAAALG
FVGEVSRVDATVLHPIIASGHIPVIATVAADETGQAYNINADTAAGEIAAAVGAEKLLLLTDVSGILADRNDPGSLVKEIDIAGVRQMVADGQVAGGMIP
KVECCVRALAQGVHTASIIDGRVPHSLLLEILTDEGTGTMITG

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Molecular Function
GO Term kinase activity
7
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES