LOC_Os04g46000

Expression Profile

RGAP LOCUS ID LOC_Os04g46000
RAP-DB ID Os04g0544200
Function cyclin, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9

2) CELLO Prediction
localization Nuclear
score 1.018

3) NUCPRED Prediction
localization Non Nuclear
score 0.26

4) Y-Loc Prediction
localization Nuclear
score 65.63
confidence value 0.25
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCYCP4;4
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.085
NLS score 0.15
Protein Sequence >LOC_Os04g46000.1 protein
MAEEEDLADMPRVVGVLAALLERVTERNDAAAAELELAVAGAPAASAFRATTKPDITVRAYMARIARFAGCSPACYVVAYIYLDRLLRRRRRACAFSVDS
YSVHRLLITAVLAAVKFMDDICYNNAYFAKVGGVSLPEMNYLEVDFLFGVGFDLNVSPETFGHYCAVLQSEMLCLELEPPPSPSPAPAARLHCFLSEDDT
SSSGSTQHQLAA

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Molecular Function
GO Term kinase activity
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Biological Process
GO Term cell cycle
Presence of Splice variants No