| RGAP LOCUS ID |
LOC_Os04g42930 |
| RAP-DB ID |
Os04g0508300 |
| Function |
OsGrx_C2.2 - glutaredoxin subgroup I, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
9 |
2) CELLO
Prediction
|
| localization |
Chloroplast |
| score |
3.272 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.03 |
4) Y-Loc
Prediction
|
| localization |
Mitochondrion |
| score |
|
| confidence value |
0.18 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsGrx|OsGrxC2;2|OsGrxC2.2 |
| Function assigned as per literature |
OsGrxC2.2 gene plays a role in embryo development in rice. |
| Subcellular localization as per literature |
Cytoplasm |
| Cells used for localization experiment |
Rice protoplasts |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
31316541 |
| Reference of localization |
https://www.frontiersin.org/articles/10.3389/fpls.2019.00848/full |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.102 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os04g42930.1 protein
MGIASSSSSTPESRKMALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFINGKHIGGCDDTLA
LNNEGKLVPLLTEAGAIASSAKTTITA |
GO Analysis |
| 1 |
| GO Category |
Molecular Function |
| GO Term |
catalytic activity |
|
| 2 |
| GO Category |
Molecular Function |
| GO Term |
molecular_function |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
cellular homeostasis |
|
| 5 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
vacuole |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| Presence of Splice variants |
YES |
