| RGAP LOCUS ID |
LOC_Os04g41340 |
| RAP-DB ID |
Os04g0490800 |
| Function |
4-nitrophenylphosphatase, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
14 |
2) CELLO
Prediction
|
| localization |
Chloroplast |
| score |
2.781 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.16 |
4) Y-Loc
Prediction
|
| localization |
Chloroplast |
| score |
9 |
| confidence value |
0.61 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
Os4NPP1 |
| Function assigned as per literature |
Os4NPP1 is theinteracting partner of OsGIRP1 |
| Subcellular localization as per literature |
cytosol |
| Cells used for localization experiment |
Rice protoplasts |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
25600999 |
| Reference of localization |
https://link.springer.com/content/pdf/10.1007%2Fs00425-015-2242-3.pdf |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
1 |
| Number of Bipartite |
0 |
| Basic residues % |
0.107 |
| NLS score |
-0.04 |
| Protein Sequence |
>LOC_Os04g41340.1 protein
MLLTRASPTFLPSTSAASPSPQQAPSSPTFGRSQYRRGGGLVSVSSPVAGQRCAARRRSVMAAAGAVPAAKLENADALIDSVETFIFDCDGVIWKGDKLI
DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVNEEEIFASSFAAAAYLQSIDFPKDKKVYVIGEDGILKELELAGFQYLGGPSDGDKKIE
LKPGFYMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAILGSTKQEPLVVGKPSTFMMDYLAKKFGIT
TSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSVQMLQSPDNSIQPDFYTNQISDFLTLKAATV |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
extracellular region |
|
| 2 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 4 |
| GO Category |
Molecular Function |
| GO Term |
hydrolase activity |
|
| 5 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytoplasm |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
vacuole |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 8 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plastid |
|
| Presence of Splice variants |
No |
