LOC_Os04g40410

Expression Profile

RGAP LOCUS ID LOC_Os04g40410
RAP-DB ID Os04g0480200
Function high affinity nitrate transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 1.257

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.21
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNAR2.2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.1
NLS score -0.47
Protein Sequence >LOC_Os04g40410.1 protein
MARFGAVIHRVFLPLLLLLVVLGACHVTPAAAAAGARLSALAKALVVEASPRAGQVLHAGEDAITVTWSLNATAAAAAAGADAGYKAVKVTLCYAPASQV
GRGWRKAHDDLSKDKACQFKIAQQPYDGAGKFEYTVARDVPTASYYVRAYALDASGARVAYGETAPSASFAVAGITGVTASIEVAAGVLSAFSVAALAVF
LVLENKKKNK

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Molecular Function
GO Term transporter activity
3
GO Category Biological Process
GO Term transport
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term biological_process
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No