| RGAP LOCUS ID |
LOC_Os04g39430 |
| RAP-DB ID |
Os04g0469800 |
| Function |
cytochrome P450, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
11 |
2) CELLO
Prediction
|
| localization |
PlasmaMembrane |
| score |
1.759 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.06 |
4) Y-Loc
Prediction
|
| localization |
Chloroplast |
| score |
9 |
| confidence value |
0.44 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
D11|CPB1|CYP724B1|GNS4|PMM1 |
| Function assigned as per literature |
|
| Subcellular localization as per literature |
NA |
| Cells used for localization experiment |
|
| NUCLEAR or Not Nuclear |
|
| PMID |
|
| Reference of localization |
|
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.112 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os04g39430.1 protein
MVGGELVLAALVILLALLLTLVLSHFLPLLLNPKAPKGSFGWPLLGETLRFLSPHASNTLGSFLEDHCSRYGRVFKSHLFCTPTIVSCDQELNHFILQNE
ERLFQCSYPRPIHGILGKSSMLVVLGEDHKRLRNLALALVTSTKLKPSYLGDIEKIALHIVGSWHGKSKDKGMVNVIAFCEEARKFAFSVIVKQVLGLSP
EEPVTAMILEDFLAFMKGLISFPLYIPGTPYAKAVQARARISSTVKGIIEERRNAGSSNKGDFLDVLLSSNELSDEEKVSFVLDSLLGGYETTSLLISMV
VYFLGQSAQDLELVKREHEGIRSKKEKDEFLSSEDYKKMEYTQHVINEALRCGNIVKFVHRKALKDVRYKEYLIPSGWKVLPVFSAVHLNPLLHGNAQQF
QPCRWEGASQGTSKKFTPFGGGPRLCPGSELAKVEAAFFLHHLVLNYRWRIDGDDIPMAYPYVEFQRGLPIEIEPLCSES |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
cellular component organization |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
anatomical structure morphogenesis |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
cell growth |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
endoplasmic reticulum |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to endogenous stimulus |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
biosynthetic process |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
lipid metabolic process |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 9 |
| GO Category |
Biological Process |
| GO Term |
signal transduction |
|
| 10 |
| GO Category |
Molecular Function |
| GO Term |
catalytic activity |
|
| 11 |
| GO Category |
Biological Process |
| GO Term |
multicellular organismal development |
|
| Presence of Splice variants |
YES |
