LOC_Os04g39110

Expression Profile

RGAP LOCUS ID LOC_Os04g39110
RAP-DB ID Os04g0465300
Function GASR4 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization extr
score 9

2) CELLO Prediction
localization Extracellular
score 4.427

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.98
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGASR2
Function assigned as per literature OsGASR2 is involved in cell proliferation in meristems and panicles development
Subcellular localization as per literature Apoplasm or cell wall
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 16905871
Reference of localization https://www.jstage.jst.go.jp/article/ggs/81/3/81_3_171/_html/-char/en
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.124
NLS score -0.29
Protein Sequence >LOC_Os04g39110.1 protein
MAPGKLAVFALLASLLLLNTIKAADYPPAPPLGPPPHKIVDPGKDCVGACDARCSEHSHKKRCSRSCLTCCSACRCVPAGTAGNRETCGRCYTDWVSHNN
MTKCP

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term response to endogenous stimulus
Presence of Splice variants YES