LOC_Os04g39080

Expression Profile

RGAP LOCUS ID LOC_Os04g39080
RAP-DB ID Os04g0464966
Function OsFBX140 - F-box domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization cyto
score 9

2) CELLO Prediction

localization Nuclear
score 3.102

3) NUCPRED Prediction

localization Nuclear
score 0.84

4) Y-Loc Prediction

localization Nuclear
score 95.06
confidence value 0.89
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020) MOF
Function assigned as per literature MEIOTIC F-BOX (MOF)Is Essential for Male Meiotic DNA Double-Strand Break Repair in Rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Meiocyte Cells of the Complemented Transgenic Line
NUCLEAR or Not Nuclear NUCLEAR
PMID 27436711
Reference of localization http://www.plantcell.org/content/28/8/1879.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis

Number of PAT4 1
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.141
NLS score 1.07
Protein Sequence >LOC_Os04g39080.1 protein
MRRERDATQIPENPMEGIPQTAAAAAAAAAAEASEPPRKRARVDGGGGGAGEEEEDRLSDLPDCLLEDILAHLGSRQAVQTSVLSRRWRNLWRGVRVVVI
DVGSFRLPGADGDPPRFRLDRIEDFADGVLSPSLHPGAARELDALRMRLDEDAVTTNFQRWIRRALWRRPATVDLYYLPRRSFSWPPAVPLTPVTAVSRL
KTLRIFGLRPTVVFGADEFPALEDLHIERCSYAHGTIASPTLKRLALVSPINGCFVREQRLTAPGLTSLRLVLPYSREEGVRVITDAPLTSLVDASITIV
DTDPGDPRNRRVNQFKVDFLVAISNLLGRLTSVRNLDLTGLNATALLDNKSQEFPMFPYLTTLLLNECDIGYKYHVLRSILQNAPNLEQLRLHNCKFVGK
SRRKAGQTQSKEKTSKCSSSTLSSACSSLKSVEIKHPRGEPSHDLLHEFLKEIPHNQWRKRSIDEETISIELNRK

GO Analysis

1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No