LOC_Os04g38870

Expression Profile

RGAP LOCUS ID LOC_Os04g38870
RAP-DB ID Os04g0462500
Function 14-3-3 protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 5

2) CELLO Prediction
localization Cytoplasmic
score 3.446

3) NUCPRED Prediction
localization Non Nuclear
score 0.3

4) Y-Loc Prediction
localization Cytoplasm
score 92
confidence value 0.69
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GF14b|OsGF14b
Function assigned as per literature GF14b positively regulates panicle blast resistance but negatively regulates leaf blast resistance
Subcellular localization as per literature Nucleus
Cells used for localization experiment rice callus and onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 16766513
Reference of localization https://academic.oup.com/dnaresearch/article/13/2/53/344906
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.13
NLS score -0.47
Protein Sequence >LOC_Os04g38870.3 protein
MSAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETEL
TKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACN
LAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAEEIREAPKRDSSEGQ

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Cellular comBiological Processonent
GO Term nuclear envelope
3
GO Category Cellular comBiological Processonent
GO Term cytoplasm
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES