LOC_Os04g38570

Expression Profile

RGAP LOCUS ID LOC_Os04g38570
RAP-DB ID Os04g0459000
Function multidrug resistance protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 11

2) CELLO Prediction
localization PlasmaMembrane
score 4.206

3) NUCPRED Prediction
localization Non Nuclear
score 0.22

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.67
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsABCB14
Function assigned as per literature OsABCB14 provides insights in monocot auxin transport and its relationship to Fe nutrition
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment epidermis cells of Nicotiana benthamiana (tobacco) leaves and Allium cepa (onion) epidermis
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24798203
Reference of localization https://onlinelibrary.wiley.com/doi/pdf/10.1111/tpj.12544
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.1
NLS score -0.22
Protein Sequence >LOC_Os04g38570.1 protein
MADESGSCGGGGGGGGGCEAVKKRVDQSVAFHELFGFADPLDWLLMAAGSAGAVVHGAAMPVFFLLFGELINGFGKNQHSLRRMTDEVSKYSLYFVYLGL
VVCASSYLEIACWMYTGERQVGALRRRYLEAVLRQDVGFFDTDARTGDVVFSVSTDTLLVQDAIGEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVI
PGIAFAGGLYAYTLTGLTSKSRDSYANAGIIAEQAIAQVRTVYSYVGESKALNSYSEAIQNTLKLGYKAGMAKGLGIGCTYGIACMSWALVFWYAGVFIR
NGQTDGGKAFTAIFSAIVGGLSLGQSFSNLGAFSKGKIAGYKLLEVIRQRPTIVQDPADGRCLDEVHGNIEFKEVAFSYPSRPDVMIFRDFSLFFPAGKT
AAVVGGSGSGKSTVVALIERFYDPNQGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAAATSANAHSFIALLPNGYNT
QVGERGLQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSENIVQEALDRLMVGRTTVVVAHRLSTIRCVDMIAVIQQGQVVETGTHDELLAKGSSG
AYAALIRFQEMARNRDFRGPSTRKSRSSRLSNSLSTRSLSLRSGSLRNLSYSYSTGADGRIEMVSNADNDRKYPAPKGYFFKLLKLNAPEWPYTILGAIG
SILSGFIGPTFAIVMSNMIEVFYFRDPNAMERKTREYVFIYIGTGLYAVVAYLVQHYFFSIMGENLTTRVRRMMLAAILRNDVGWFDQEENNSSLVAARL
STDAADVKSAIAERISVILQNMTSLLVSFVVGFIIEWRVAVLILVTFPLLVLANFAQQLSMKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKVLS
LFCTELRVPQMHSLRRSQISGALFGLSQLSLYASEALILWYGAHLVRHHVSTFSKVIKVFVVLVITANTVAETVSLAPEIVRGGESIRSVFAILNYRTRI
DPDEPETEPVESVRGDIDFRHVDFAYPSRPDVMVFKDFSLRIRAGQSQALVGASGSGKSTVIALIERFYDPLAGKVMIDGKDIRRLNVRSLRLKIGLVQQ
EPVLFATSIFENIAYGKDGATEEEVIEAAKVANMHGFVSALPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPAVLLLDEATSALDAESECVLQEALER
IMKGRTAVLVAHRLSTIRGVDSIAVVQDGRVVEQGSHGELVSRPDGAYSRLLQLQLHHG

GO Analysis
1
GO Category Biological Process
GO Term response to endogenous stimulus
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Biological Process
GO Term tropism
4
GO Category Biological Process
GO Term flower development
5
GO Category Biological Process
GO Term post-embryonic development
6
GO Category Molecular Function
GO Term protein binding
7
GO Category Biological Process
GO Term transport
8
GO Category Cellular comBiological Processonent
GO Term membrane
9
GO Category Cellular comBiological Processonent
GO Term plasma membrane
10
GO Category Biological Process
GO Term signal transduction
11
GO Category Biological Process
GO Term cellular process
12
GO Category Biological Process
GO Term cellular component organization
13
GO Category Molecular Function
GO Term transporter activity
14
GO Category Molecular Function
GO Term hydrolase activity
15
GO Category Biological Process
GO Term multicellular organismal development
16
GO Category Biological Process
GO Term response to external stimulus
17
GO Category Biological Process
GO Term catabolic process
18
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
Presence of Splice variants YES